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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12339470 chr9:90795821 C/G ZCCHC6 chr9:88902648-88969369:- -0.72 -7.14 4.7E-12 Box Plot
BLCA rs12347147 chr9:17859223 A/G HAUS6 chr9:19053141-19103117:- -0.55 -6.43 3.91E-10 Box Plot
BLCA rs12347147 chr9:17859223 A/G PSIP1 chr9:15464064-15511017:- -0.55 -6.61 1.3E-10 Box Plot
BLCA rs12347147 chr9:17859223 A/G RRAGA chr9:19049393-19050981:+ -0.79 -7.44 6.64E-13 Box Plot
BLCA rs12347147 chr9:17859223 A/G SNAPC3 chr9:15422702-15465951:+ -0.68 -6.67 8.94E-11 Box Plot
BLCA rs12353399 chr9:4635448 C/T KIAA0020 chr9:2720469-2844241:- -0.6 -6.36 5.65E-10 Box Plot
BLCA rs12355439 chr10:52135089 A/G CDH15 chr16:89238175-89261900:+ 0.45 5.99 4.89E-9 Box Plot
BLCA rs12362483 chr11:23038339 A/G C11orf58 chr11:16634679-16778428:+ 0.7 6.15 1.9E-9 Box Plot
BLCA rs12369652 chr12:92661697 A/G ANXA2P3 chr10:66585329-66586336:+ 0.34 6.29 8.67E-10 Box Plot
BLCA rs12369652 chr12:92661697 A/G ATP5EP2 chr13:28519343-28519727:+ 0.4 7.33 1.4E-12 Box Plot
BLCA rs12369652 chr12:92661697 A/G FLJ44635 chrX:71364034-71381599:+ 0.39 6.95 1.57E-11 Box Plot
BLCA rs12369652 chr12:92661697 A/G LOC100130932 chr19:14599758-14600688:+ 0.35 6.2 1.43E-9 Box Plot
BLCA rs12369652 chr12:92661697 A/G RPL13AP3 chr14:56232895-56234435:+ 0.41 8.22 3.27E-15 Box Plot
BLCA rs12369652 chr12:92661697 A/G RPL19P12 chr7:102781796-102782386:- 0.45 8 1.53E-14 Box Plot
BLCA rs12369652 chr12:92661697 A/G RPL31P11 chr1:161653485-161655042:- 0.39 6.53 2.1E-10 Box Plot